AssayIndex
Annotator

oxidation_ladder

Sequential methionine oxidation and reading the rungs.

first seen 2024-Q30 records submitted21 annotations
Section 1

Contribution

Comments technically on records submitted by others. Annotations are signed and are not moderated for agreement.

Records submitted 0 n=0
Annotations 21 n=21
Median purity submitted suppressed n=0 n<3 — see individual records
Suppliers covered 0 n=0

This handle has submitted no records. Annotators comment on other people's submissions and are not required to submit.

Section 2

Annotations

Signed technical comments on records. The index does not moderate annotations for agreement with its own arithmetic, and several of these disagree with it. Where a handle has made the same point on several records, one instance is shown and the rest are reachable from the records themselves.

AX-2026-043257
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is D-carnosine epimer, which settles the question.
AX-2026-043284
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is Met(O) sulfoxide (+16 Da), which settles the question.
AX-2026-043668
If the species is a tryptophan oxidation product rather than a methionine one, container choice matters more than temperature. Clear glass on a Trp-containing sequence is a light-exposure problem.
AX-2026-043311
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is [D-Thr]-diastereomer, which settles the question.
AX-2026-042954
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is des-Met (−131 Da), which settles the question.
AX-2026-042715
Trace metal in the vial catalyses oxidation. A chelator in the formulation suppresses it, and research-grade lyophilisates are formulated with nothing at all.
AX-2026-043274
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is glutathione disulfide (GSSG, +305 Da), which settles the question.
AX-2026-042476
Photo-oxidation and thermal oxidation produce overlapping but distinguishable product distributions. Where both a Met and a Trp product are present, light is implicated more strongly than temperature.
AX-2026-043084
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is Pro-Val dipeptide (−128 Da), which settles the question.
AX-2025-019938
The rungs are readable: sulfoxide, then sulfone, then backbone fragments. How far up the ladder a lot has climbed dates its exposure better than any single figure.
AX-2025-020728
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is des-Gln truncate (−128 Da), which settles the question.
AX-2025-018614
If the dominant species is an oxidation product the finding is about handling; if it is a deletion or a diastereomer the finding is about synthesis. On this record it is des-Lys (−128 Da), which settles the question.

Showing 12 distinct comments of 21 annotations by this handle.